Weatherwise, "Jupiter: Where the Weather Runs Wild", Oct/Nov 1991, pg 23-26
Astronomy, "Galileo at Jupiter", Jan 1996, pg 36-45
There are also lots of articles about the collision of Jupiter with Comet Shoemaker-Levy 9 which talk about how the impacts affected Jupiter's atmosphere.
These include:
Time, July 25, 1994, pg 57; Aug 1, 1994, pg 50-51
Newsweek, Aug 1, 1994, pg 60-62
US News & World Report, Aug 1, 1994, pg 54-59
Odyssey, Oct 1994, pg 26-31
Astronomy, "Death of a Comet: Shoemaker-Levy 9", Oct 1994, pg
40-46
Sky & Telescope, "The Great Comet Crash of 1994: A First Report",
Oct 1994, pg 18-23; "The Great Dark Spots of Jupiter", Nov 1994, pg 30-34